PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.28KZQ
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 218aa    MW: 25383.2 Da    PI: 6.7941
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.28KZQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92e-092268555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +E++RR++++  +++L +llP +    ++ l   + + kA++YIksL+
  Araip.28KZQ 22 RRVIEKNRRNHMKMLYSKLNSLLPRP----KEPLPLPDQVDKAINYIKSLE 68
                 5689*********************9....899****************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-101579IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.2E-81579IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.37E-51772No hitNo description
PROSITE profilePS5088811.4521767IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.1E-62368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-42373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MNQLGSRSQA SPSSTNKKKI ERRVIEKNRR NHMKMLYSKL NSLLPRPKEP LPLPDQVDKA  60
INYIKSLEEK VKMAKEKRER SLGMEIRRKR TRGDCSGVDR QKPPQLEVHE IGSCVEIEMT  120
CGLDTQFIFY EIIRILNEEN IDVKSVNSSL IENSMYHILR AEISPSLLQF GVTKVSERLK  180
RFVNEPTSEI ELQSDYQLLD FEIDTDELAE LLDFLEEK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016185979.11e-158PREDICTED: uncharacterized protein LOC107627667
TrEMBLA0A0B2RQ844e-77A0A0B2RQ84_GLYSO; Transcription factor bHLH36
TrEMBLI1LS394e-77I1LS39_SOYBN; Uncharacterized protein
STRINGGLYMA12G12880.11e-76(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-19bHLH family protein